antismash_json2gff
Description¶
Transforms antismash json output file into GFF format
Installation¶
ebi-metagenomics/antismash/json2gff
nf-core modules -g https://www.github.com/ebi-metagenomics/nf-modules install antismash/json2gff
Tools¶
antismash_gff_builder¶
Collection of scripts and tools for MGnify pipelines.
Input¶
| Name | Type | Description | Pattern |
|---|---|---|---|
meta |
map | Groovy Map containing sample information e.g. [ id:'sample1' ] |
- |
antismash_json |
file | Result generated by antismash tool in json format | *.json |
Output¶
| Name | Type | Description | Pattern |
|---|---|---|---|
gff |
file | - | |
versions_mgnifypipelinestoolkit |
file | - |
