blast_makeblastdb
Description¶
Builds a BLAST database
Installation¶
ebi-metagenomics/blast/makeblastdb
nf-core modules -g https://www.github.com/ebi-metagenomics/nf-modules install blast/makeblastdb
Tools¶
blast¶
BLAST finds regions of similarity between biological sequences.
Input¶
| Name | Type | Description | Pattern |
|---|---|---|---|
meta |
map | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] | - |
fasta |
file | Input fasta file | *.{fa,fasta,fa.gz,fasta.gz} |
Output¶
| Name | Type | Description | Pattern |
|---|---|---|---|
db |
file | - | |
versions |
file | - |
