downloadfromfire
Description¶
Downloads files from EBI FIRE S3 storage using FTP paths
Pipelines¶
This module is used by the following pipelines:
Installation¶
ebi-metagenomics/downloadfromfire
nf-core modules -g https://www.github.com/ebi-metagenomics/nf-modules install downloadfromfire
Tools¶
boto3¶
AWS SDK for Python
Input¶
| Name | Type | Description | Pattern |
|---|---|---|---|
meta |
map | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] | - |
input_paths |
list | List of FTP paths to download from FIRE S3 storage | ftp://* |
Output¶
| Name | Type | Description | Pattern |
|---|---|---|---|
downloaded_files |
file | - | |
versions |
file | - |
