Look up analysis accession IDs for one or more study or sample accessions
Source:R/AllGenerics.R
, R/searchAnalysis.R
searchAnalysis.Rd
Look up analysis accession IDs for one or more study or sample accessions
Arguments
- x
A
MgnifyClient
object.- ...
Optional arguments; not currently used.
- type
A single character value specifying a type of accession IDs specified by
accession
. Must be "studies" or "samples".- accession
A single character value or a vector of character values specifying study or sample accession IDs that are used to retrieve analyses IDs.
Examples
# Create a client object
mg <- MgnifyClient(useCache = FALSE)
# Retrieve analysis ids from study MGYS00005058
result <- searchAnalysis(mg, "studies", c("MGYS00005058"))
#> Fetching analyses...
#>
|
| | 0%
|
|======================================================================| 100%
if (FALSE) {
# Retrieve all analysis ids from samples
result <- searchAnalysis(
mg, "samples", c("SRS4392730", "SRS4392743"))
}